API Reference# Core Package# Module Overview Molecular Interaction Analyzer Molecular Interaction Data Structures Core Data Structures PDB File Parser PDB Structure Fixer Vecctor Support CCD Package# CCD Package CCD Analyzer Constants Generator Generate CCD Constants Data Storage Command Line Interface# Main CLI Module Graphical User Interface# Graphical User Interface Main Window Geometry Cutoffs Dialog Preset Manager Dialog PDB Fixing Dialog Results Panel Chain Visualization Visualization Renderer Protocol GraphViz Renderer Matplotlib Renderer Export Manager GraphViz Preferences Dialog Constants# Constants Modules Analysis Parameters Atomic Data PDB Structure Constants Miscellaneous Constants Application Metadata Utilities# Utilities Atom Utilities GraphViz Utilities
